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| Welcome to PyroSequencing website. This website hosts CAGE Microbiome Analysis Database and Analysis Tools |
CAGE Microbiome Analysis Database stores experiment information such as ExperimentCodes, SampleIDs, SampleTypes, PrimerSets, Barcodes, Cohorts, Treatments, etc.
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| Analysis Tools are taxonomy-based and phylogeny-based analyses. Both analyses use CAGE cleaned data as input. "CAGE Cleaned data" is the raw data from 454 pyrosequencing machine processed through the quality filter then categorized into files by barcodes. All CAGE cleaned sequences have valid forward primers, barcodes and meet you-picked criteria: number of Ns, Minimum Sequence Length, Maximum Sequence Length, and Average Quality Score. |
Client users, please use CAGE provided username and password to login.
To see sample sequences shared by other users and experience the database functionality, use this login: guest/anonymous |
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